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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903754.1_cds_XP_016453889.1_47971
CDS Infomation

[gene=LOC107778190] [db_xref=GeneID:107778190] [protein=branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X2] [protein_id=XP_016453889.1] [location=complement(join(58685..58799,60098..60210,60327..60422,60643..60759,60868..60966,61055..61186,61269..61445,61534..61656))] [gbkey=CDS]
Sequence

ATGCCAACTGATTATATGTATGTGACAAAAAGCACTGAAGATGGGCATTTCGAACGAGGC
CAACTTAATCGCTATGAGAATATCCAATTGAGCCCCTCTGCTGGTGTCTTAAATTATGGA
CAAGGGCTGTTTGAAGGAACAAAAGCCTATAAAAGAGATAATGGACGCCTGTTTCTATTC
CGTCCTCATCTGAATGCAATCAGAATACAGATTGGAGCTGAAAGAATGTGTATGCCCTGT
CCTTCCACGGATCAATTTGTGGACGCTGTGAAACAAATTGCTCTAGCTAACAAGCGATGG
GTTCCTCCTCCTGGAAAAGGATCTCTATATATTAGGCCTCTGCTTTTTGGAAGTGGACCT
GTACTCGGATTGGCTCCAGCACCTGAGTACACTTTCCTTGTTTATGCTTCCCCTGTGGGA
AACTATTTCAAGGAAGGAACAGCACCATTGAAGTTGATTGTCGAGGAAGATTTTCATCGT
GCCTCACGTGGTGGAGCTGGTGGAGTCAAAAGCATTACTAACTATGCCCCTGTTTTACAA
GCCATAAGGAATGCAAGGGGGAGAGGATTTTCTGATGTATTGTACCTTGATTCTGTAAAT
AAGAGATACATTGAAGAGGTCTCTTCCTGTAACATTTTCCTTGTGAAGGGAAAAGTGATT
TCAACCCCAGTAGCATTTGGAACCATTCTTGAAGGAGTGACAAGAAAAAGCATCATGGAC
ATTGCAACTGATCTTGGATACCAGGTTGAAGAACGTTTAATCGAAGCTGATGAATTGATT
AGTGCCGATGAAGTCTTCTGCACAGGCACTGCAGTTGGTGTTGCTCCCGTAGGTAGTATT
ACTTATAAAGGCAAAAGGATTGAGTATAAAATAAGCTCGGAGTTAACATGTAAGCAACTT
TATTCGAGACTCGTAGGGATACAAATAGGCCTAATCGAGGACAAGAGGGATTGGATTGTT
GAAATCGAATGA

Peptide Sequence

PEP ID

XP_016453889.1
PEP Infomation

PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like isoform X2 [Nicotiana tabacum]
Sequence

MPTDYMYVTKSTEDGHFERGQLNRYENIQLSPSAGVLNYGQGLFEGTKAYKRDNGRLFLF
RPHLNAIRIQIGAERMCMPCPSTDQFVDAVKQIALANKRWVPPPGKGSLYIRPLLFGSGP
VLGLAPAPEYTFLVYASPVGNYFKEGTAPLKLIVEEDFHRASRGGAGGVKSITNYAPVLQ
AIRNARGRGFSDVLYLDSVNKRYIEEVSSCNIFLVKGKVISTPVAFGTILEGVTRKSIMD
IATDLGYQVEERLIEADELISADEVFCTGTAVGVAPVGSITYKGKRIEYKISSELTCKQL
YSRLVGIQIGLIEDKRDWIVEIE

Transcript Sequence

Gene sequence data has not been registered.